Towards Atoms of Large Language Models 文章

arXiv:2509.20784v3 Announce Type: replace Abstract: The fundamental representational units (FRUs) of large language models (LLMs) remain undefined, limiting further understanding of their underlying mechanisms. In this paper, we introduce Atom Theory to systematically define, evaluate, and identify such FRUs, which we term atoms. Building on the atomic inner product (AIP), a non-Euclidean metric that captures the underlying geometry of LLM representations, we formally define atoms and propose two key criteria for ideal atoms: faithfulness ($R^2$) and stability ($q^*$). We further prove that atoms are identifiable under threshold-activated sparse autoencoders (TSAEs). Empirically, we uncover a pervasive representation shift in LLMs and demonstrate that the AIP corrects this shift to capture the underlying representational geometry. We find that two widely used units, neurons and features, fail to qualify as ideal atoms: neurons are faithful ($R^2=1$) but unstable ($q^*=0.