The PDBbind Database:  Collection of Binding Affinities for Protein−Ligand Complexes with Known Three-Dimensional Structures 论文

2004Journal of Medicinal Chemistry引用 1157
Protein Structure and DynamicsComputational Drug Discovery MethodsEnzyme Structure and Function

摘要

We have screened the entire Protein Data Bank (Release No. 103, January 2003) and identified 5671 protein-ligand complexes out of 19 621 experimental structures. A systematic examination of the primary references of these entries has led to a collection of binding affinity data (K(d), K(i), and IC(50)) for a total of 1359 complexes. The outcomes of this project have been organized into a Web-accessible database named the PDBbind database.