TorchANI: A Free and Open Source PyTorch-Based Deep Learning Implementation of the ANI Neural Network Potentials 论文

2020Journal of Chemical Information and Modeling引用 318
Machine Learning in Materials ScienceFuel Cells and Related MaterialsComputational Drug Discovery Methods

详细信息

发表期刊/会议
Journal of Chemical Information and Modeling
发表日期
2020-06-22
发表年份
2020

关键词

Machine Learning in Materials ScienceFuel Cells and Related MaterialsComputational Drug Discovery Methods

摘要

This paper presents TorchANI, a PyTorch-based program for training/inference of ANI (ANAKIN-ME) deep learning models to obtain potential energy surfaces and other physical properties of molecular systems. ANI is an accurate neural network potential originally implemented using C++/CUDA in a program called NeuroChem. Compared with NeuroChem, TorchANI has a design emphasis on being lightweight, user friendly, cross platform, and easy to read and modify for fast prototyping, while allowing acceptable sacrifice on running performance. Because the computation of atomic environmental vectors and atomic neural networks are all implemented using PyTorch operators, TorchANI is able to use PyTorch's autograd engine to automatically compute analytical forces and Hessian matrices, as well as do force training without requiring any additional codes. TorchANI is open-source and freely available on GitHub: https://github.com/aiqm/torchani.