A Simple New Approach to Variable Selection in Regression, with Application to Genetic Fine Mapping 论文

2020Journal of the Royal Statistical Society Series B (Statistical Methodology)引用 1117
Gene expression and cancer classificationGenetic and phenotypic traits in livestockBayesian Methods and Mixture Models

摘要

model. Further, this approximate posterior distribution naturally yields convenient novel summaries of uncertainty in variable selection, providing a Credible Set of variables for each selection. Our methods are particularly well-suited to settings where variables are highly correlated and detectable effects are sparse, both of which are characteristics of genetic fine-mapping applications. We demonstrate through numerical experiments that our methods outperform existing methods for this task, and illustrate their application to fine-mapping genetic variants influencing alternative splicing in human cell-lines. We also discuss the potential and challenges for applying these methods to generic variable selection problems.